imod
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Creates binary mask from imod boundary model.
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Jan 25, 2024 - Python
FerriTag modelling and spatial analysis in Igor Pro
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May 11, 2018 - IGOR Pro
SynapticVes-Py. Python code to support 3D quantitative analysis of presynaptic active zones in hippocampal mossy fiber boutons using electron tomograms and IMOD model output.
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Aug 21, 2022 - Jupyter Notebook
Cryo-electron tomography (cryo-ET) pipeline for viral spike structure analysis. Includes tilt-series alignment (IMOD), tomogram reconstruction, particle picking, subtomogram averaging with C3 symmetry, and iterative refinement.
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Mar 19, 2026
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