this project aims to be an easy and reusable way to use supervised machine learning techniques

Repository for pan-spefic primers designed for tiled full genome sequencing or qPCR of viral pathogens. Pathogens include amongst others Hepatitis E virus, Hepatitis A virus, Poliovirus and SARS-COV-2. Primers were designed with varVAMP.

The algorithm for diagnosing hepatitis with Naive Bayes ' Theorem.

RocaSec: A standalone GUI-based package for robust co-evolutionary analysis of proteins

Genome-to-Genome Study of Hepatitis B Virus-infected individuals; EPFL, Fellay lab

Hepatitis B virus Co-ordinate Conversion Tool

Software Engineering Project

A GLUE project for hepatitis B virus (HBV).

This project builds a machine learning model to predict the survival of patients with hepatitis based on clinical and demographic features. It includes data preprocessing, training classification algorithms, evaluating model performance, and saving the final model for deployment.

Extension to HCV-GLUE project, to analyse binding sites for HCV neutralising antibodies.

cds-hooks service to prompt care providers to screen baby-boomers for hepatitis c

A GLUE project for hepadnaviruses (family Hepadnaviridae)

NCHHSTP-PHIN-VADS

Extension to HBV-GLUE - incorporates all sequences from GenBank.

Here's an implementation of the Hepatits B deterministic and controlled model derived in the paper mensioned in the README using pythons numpy and matplotlib. In addition to the notebook there is a desktop application that takes the model parameters and creates solution plots for the model.

A Julia-based machine learning framework to identify predictive biomarkers for chronic Hepatitis B progression from sparse clinical data.

Web application for HBV-GLUE

Shiny app for Hepatitis C section of the ScotPHO's website

A personal project to explore and provide snapshot of Viral Hepatitis showcasing both the triumphs and areas demanding intensified focus.

A collection of R files for each of my respective blog posts, containing exploratory visualizations and cleaned dfs to be used in Flourish or Datawrapper.