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CharlesDexterW/README.md

👋 Hi, I'm Benjamín Garcés — Biochemist, researcher, and science communicator based in Ecuador.

🔬 My work sits at the intersection of biochemistry, molecular biology, and bioinformatics. I'm currently working as a medical interpreter (ES↔EN) and developing computational pipelines for genomic and enzymatic data analysis.

🧬 Research interests:

  • Genomics
  • Enzyme structural & phylogenetic analysis
  • miRNA sequence analysis
  • Cryopreservation of endangered amphibians
  • Endocrine disruptors analysis via HPLC
  • Bacteriophages

💻 Tools & languages:

  • Python (genomic pipelines, data analysis, visualization)
  • R (statistical analysis, ggplot2)
  • Bash / Shell scripting
  • Command-line bioinformatics tools (SeqKit, BLAST, NCBI)

📄 Selected work:

  • Freire & Garcés (2022) — Springer International Publishing (TICEC 2022)
  • Undergraduate thesis: Phylogenetic Analysis of PETase enzyme of I. sakaiensis

I'm open to remote research collaborations in genomics, molecular biology, and bioinformatics.

📫 Reach me at: agarces2381@gmail.com

🌐 Portfolio: https://charlesdexterw.github.io/BGC/

🔗 LinkedIn: https://www.linkedin.com/in/abgc2381

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  1. atelopus-sperm-cryopreservation-analysis atelopus-sperm-cryopreservation-analysis Public

    Demonstrating data manipulation and statistical analysis abilities through curated datasets and code.

    R 1

  2. mm9-genomic-seq-analysis mm9-genomic-seq-analysis Public

    This Python script performs a detailed analysis of genomic sequence data, specifically focusing on gene information and chromosomal sequences from the mouse genome (mm9 build). It demonstrates fund…

    Python

  3. C.-elegans-miRNA-Sequence-Analysis-Pipeline C.-elegans-miRNA-Sequence-Analysis-Pipeline Public

    This is an automated Bash pipeline for reproducible miRNA analysis from miRBase v22. I used C. elegans (lin-4/let-7) precursors using SeqKit for biochemical metric extraction.

    Shell 1

  4. TCA-genomics-MM9 TCA-genomics-MM9 Public

    This pipeline aims to analyze the Cytric acid cicle enzimes of mm9

    Python 1