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38 changes: 38 additions & 0 deletions .github/workflows/release.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,38 @@
name: Release to PyPI

on:
release:
types: [published]

jobs:
build-and-publish:
runs-on: ubuntu-latest
environment: pypi
permissions:
id-token: write # required for PyPI trusted publisher (OIDC)

steps:
- uses: actions/checkout@v4

- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: "3.12"

- name: Install build tools
run: python -m pip install --upgrade pip build

# Strip a leading 'v' from the tag (e.g. v1.2.3 → 1.2.3) and write it
# into pyproject.toml so the published package version matches the tag.
- name: Sync version with release tag
run: |
TAG="${{ github.ref_name }}"
VERSION="${TAG#v}"
sed -i "s/^version = \".*\"/version = \"$VERSION\"/" pyproject.toml
echo "Building version $VERSION"

- name: Build distribution
run: python -m build

- name: Publish to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
21 changes: 17 additions & 4 deletions lars/preprocessing/radar_preprocessing.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,7 @@ def preprocess_radar_data(file_path, output_path, date=None,
radar_field='corrected_reflectivity',
x_bounds=(-150000, 150000), y_bounds=(-150000, 150000),
size_px=256, dpi=150, min_ref=-99.,
dbz_thresholds=(10, 20, 30, 40, 50),
**kwargs):
"""
Preprocess cf/Radial radar data from a given file path. This module will load the radar data,
Expand All @@ -28,7 +29,9 @@ def preprocess_radar_data(file_path, output_path, date=None,
y_bounds (tuple): The y-axis bounds for plotting in meters.
size_px (int): Width and height of the output PNG in pixels. Default is 256.
dpi (int): Dots per inch for the saved figure. Default is 150.
min_ref (float): The minimum reflectivity to consider
min_ref (float): The minimum reflectivity to consider.
dbz_thresholds (sequence of float): Reflectivity thresholds in dBZ for which gate
counts and coverage percentages are computed. Default is (10, 20, 30, 40, 50).

**kwargs:

Expand All @@ -38,8 +41,10 @@ def preprocess_radar_data(file_path, output_path, date=None,
-------
label_df: pd.DataFrame
DataFrame containing labels, paths, and times for the radar data.
Includes n_gates_<T>dbz (count) and pct_gates_<T>dbz (% of total gates)
columns for each threshold T in dbz_thresholds.
"""

file_list = glob.glob(file_path + '/*.nc')
if date is not None:
if isinstance(date, str):
Expand All @@ -48,7 +53,11 @@ def preprocess_radar_data(file_path, output_path, date=None,
for date_str in date:
file_list2.extend([f for f in file_list if date_str in f])
file_list = file_list2
out_df = pd.DataFrame(columns=['file_path', 'time', 'label', 'ref_min', 'ref_max'])
dbz_thresholds = list(dbz_thresholds)
count_cols = [f'n_gates_{t}dbz' for t in dbz_thresholds]
pct_cols = [f'pct_gates_{t}dbz' for t in dbz_thresholds]
out_df = pd.DataFrame(columns=['file_path', 'time', 'label', 'ref_min', 'ref_max']
+ count_cols + pct_cols)
if not "vmin" in kwargs:
kwargs['vmin'] = -20
if not "vmax" in kwargs:
Expand Down Expand Up @@ -80,6 +89,9 @@ def preprocess_radar_data(file_path, output_path, date=None,
sweep[radar_field] > min_ref).values
ref_min = np.nanmin(masked)
ref_max = np.nanmax(masked)
total_gates = masked.size
gate_counts = [int(np.sum(masked > t)) for t in dbz_thresholds]
gate_pcts = [round(n / total_gates * 100, 4) for n in gate_counts]
ax.axis('off')
ax.set_title('')
ax.set_ylabel('')
Expand All @@ -96,7 +108,8 @@ def preprocess_radar_data(file_path, output_path, date=None,
os.path.basename(file).replace('.nc', '.png')),
dpi=dpi, bbox_inches='tight', pad_inches=0)
plt.close(fig)
out_df.loc[len(out_df)] = [file_name, time_str, label, ref_min, ref_max]
out_df.loc[len(out_df)] = ([file_name, time_str, label, ref_min, ref_max]
+ gate_counts + gate_pcts)

else:
print(f"Sweep mode is not PPI or sector scan in {file}, skipping.")
Expand Down
6 changes: 5 additions & 1 deletion tests/integration/test_radar_preprocessing.py
Original file line number Diff line number Diff line change
Expand Up @@ -70,7 +70,11 @@ def test_dataframe_row_count(preprocessing_output):

def test_dataframe_columns(preprocessing_output):
_, label_df = preprocessing_output
assert set(label_df.columns) == {"file_path", "label", "ref_min", "ref_max"}
assert set(label_df.columns) == {
"file_path", "label", "ref_min", "ref_max",
"n_gates_10dbz", "n_gates_20dbz", "n_gates_30dbz", "n_gates_40dbz", "n_gates_50dbz",
"pct_gates_10dbz", "pct_gates_20dbz", "pct_gates_30dbz", "pct_gates_40dbz", "pct_gates_50dbz",
}


def test_labels_are_unknown(preprocessing_output):
Expand Down
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