we should track down and fix the deprecated usage of summarise() (versus refame()) for what we're doing in clin_nowcast().
library(fiphde)
get_cdc_clin(region = "state") %>%
dplyr::filter(location == "48") %>%
clin_nowcast(., weeks_to_replace = 2)
#> Warning: Returning more (or less) than 1 row per `summarise()` group was deprecated in
#> dplyr 1.1.0.
#> ℹ Please use `reframe()` instead.
#> ℹ When switching from `summarise()` to `reframe()`, remember that `reframe()`
#> always returns an ungrouped data frame and adjust accordingly.
#> ℹ The deprecated feature was likely used in the fiphde package.
#> Please report the issue to the authors.
#> This warning is displayed once every 8 hours.
#> Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
#> generated.
#> # A tibble: 482 × 8
#> abbreviation location epiyear epiweek week_start p_positive n_positive total
#> <chr> <chr> <dbl> <dbl> <date> <dbl> <dbl> <dbl>
#> 1 TX 48 2015 40 2015-10-04 1.68 19 1129
#> 2 TX 48 2015 41 2015-10-11 1.91 22 1150
#> 3 TX 48 2015 42 2015-10-18 1.66 18 1084
#> 4 TX 48 2015 43 2015-10-25 1.83 20 1093
#> 5 TX 48 2015 44 2015-11-01 1.4 17 1217
#> 6 TX 48 2015 45 2015-11-08 2.31 31 1343
#> 7 TX 48 2015 46 2015-11-15 2.89 33 1140
#> 8 TX 48 2015 47 2015-11-22 1.27 19 1494
#> 9 TX 48 2015 48 2015-11-29 1.35 20 1480
#> 10 TX 48 2015 49 2015-12-06 1.54 24 1557
#> # ℹ 472 more rows
we should track down and fix the deprecated usage of
summarise()(versusrefame()) for what we're doing inclin_nowcast().